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In addition, it is possible to obtain the STs of the isolates collected within the database for a selected country over a specific time period. These reports also include the following datasets: isolates, genotypes, and serotypes. The output of these reports is a tabular file (.csv) containing the information for the data downloaded from the database. This file can be easily loaded into most commonly used spreadsheet programs such as Excel and Microsoft Word.
There are extensive help sections that can be accessed by clicking on the help icon in the top left corner of the website. The help sections include an extensive information on the structure of the database, on how to download the data, and on how to use the reports . A brief introduction on the website states the data and why it is useful to researchers, and also includes the different reports that can be generated using the data contained in the database. The data and reports can be accessed using the links mentioned above.
The user can select a country and a requested time frame (to display isolates until the selected date) and the report is generated. The user can also select countries and timeframes for other reports, which can be downloaded as well.
In addition to visualizations, the report can be used to download individual isolates (e.g. for phylogenetic analysis). The availability of these isolates can be ordered by Date, Name, or ST. To facilitate further work, the isolates are also provided in FASTA format or a plain text file.
Reports can be generated for as many countries and time periods as needed and saved for later use as well as exported to an Excel file. Reports are available for download at the CDC MRS maps page.
Statistical analyses can be performed on the aggregated data by MGT level for a selected country and time period. These analyses are performed in the same manner as described in the statistics page . Reports are available for download at the CDC MRS statistics page .
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